Burkholderia mallei
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia mallei
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; s__Burkholderia pseudomallei
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Burkholderia; x__pseudomallei group; s__Burkholderia pseudomallei
NCBI Strain Identifiers C45
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000011705.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.34%
CheckM Strain Heterogeneity 100.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 78
N50 Contigs 278,946 bp
Longest Contig 705,147 bp
Scaffold Count 66
N50 Scaffolds 288,235 bp
Longest Scaffold 705,147 bp
Genome Size 7,103,890 bp
Protein Count 5,859
Coding Density 84.11%
GC Percentage 68.22%
Ambiguous Bases 7
GTDB representative GCA_000011705.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 7909_4#12
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA807004
Country Thailand
Date 2015-4-22
Genbank Assembly Accession GCA_001321105.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source trachea
Latitude Longitude None
Molecule Count N/A
CDS Count 7,281
Refseq Category na
Seq Rel Date 2015/04/22
Spanned Gaps 12
Species Taxid 28450
SSU Count 1
Submitter SC
Taxid 28450
Total Gap Length 585
Translation Table 11
tRNA Count (total) 54
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CIGX00000000.1