Pseudomonas_E putida_H
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas_E; s__Pseudomonas_E putida_H
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas sp. NBRC 111134
NCBI Strain Identifiers NBRC 111134
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002356095.1)
Genome Characteristics
CheckM Completeness 99.88%
CheckM Contamination 2.59%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 147
N50 Contigs 69,358 bp
Longest Contig 231,824 bp
Scaffold Count 147
N50 Scaffolds 69,358 bp
Longest Scaffold 231,824 bp
Genome Size 6,142,670 bp
Protein Count 5,632
Coding Density 89.20%
GC Percentage 62.04%
Ambiguous Bases N/A
GTDB representative GCA_002356095.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM132065v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00031669
Country None
Date 2015-10-4
Genbank Assembly Accession GCA_001320655.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,671
Refseq Category na
Seq Rel Date 2015/10/04
Spanned Gaps 0
Species Taxid 1661049
SSU Count 1
Submitter National Institute of Technology and Evaluation
Taxid 1661049
Total Gap Length 0
Translation Table 11
tRNA Count (total) 68
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master BCBK00000000.1