Pseudomonas_E parafulva
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas_E; s__Pseudomonas_E parafulva
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas sp. NBRC 111119
NCBI Strain Identifiers NBRC 111119
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000730645.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.17%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 106
N50 Contigs 94,670 bp
Longest Contig 362,961 bp
Scaffold Count 106
N50 Scaffolds 94,670 bp
Longest Scaffold 362,961 bp
Genome Size 5,415,012 bp
Protein Count 4,978
Coding Density 89.99%
GC Percentage 62.33%
Ambiguous Bases N/A
GTDB representative GCA_000730645.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM132012v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00031654
Country None
Date 2015-10-4
Genbank Assembly Accession GCA_001320125.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,983
Refseq Category na
Seq Rel Date 2015/10/04
Spanned Gaps 0
Species Taxid 1661034
SSU Count 1
Submitter National Institute of Technology and Evaluation
Taxid 1661034
Total Gap Length 0
Translation Table 11
tRNA Count (total) 50
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master BCAV00000000.1