Pseudomonas_E hunanensis
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas_E; s__Pseudomonas_E hunanensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas sp. NBRC 111118
NCBI Strain Identifiers NBRC 111118
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003671955.1)
Genome Characteristics
CheckM Completeness 97.15%
CheckM Contamination 2.89%
CheckM Strain Heterogeneity 6.06
5S Count 1
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 206
N50 Contigs 63,724 bp
Longest Contig 383,032 bp
Scaffold Count 206
N50 Scaffolds 63,724 bp
Longest Scaffold 383,032 bp
Genome Size 6,400,771 bp
Protein Count 6,027
Coding Density 88.76%
GC Percentage 61.05%
Ambiguous Bases N/A
GTDB representative GCA_003671955.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM132008v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00031653
Country None
Date 2015-10-4
Genbank Assembly Accession GCA_001320085.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,041
Refseq Category na
Seq Rel Date 2015/10/04
Spanned Gaps 0
Species Taxid 1661033
SSU Count 1
Submitter National Institute of Technology and Evaluation
Taxid 1661033
Total Gap Length 0
Translation Table 11
tRNA Count (total) 40
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master BCAU00000000.1