Pseudomonas_E sp001320045
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas_E; s__Pseudomonas_E sp001320045
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas sp. NBRC 111117
NCBI Strain Identifiers NBRC 111117
GTDB Type Material Designation not type material
GTDB Representative of Species True (10 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.62%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 61
N50 Contigs 230,473 bp
Longest Contig 751,649 bp
Scaffold Count 61
N50 Scaffolds 230,473 bp
Longest Scaffold 751,649 bp
Genome Size 5,532,473 bp
Protein Count 4,990
Coding Density 90.23%
GC Percentage 64.47%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM132004v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00031652
Country None
Date 2015-10-4
Genbank Assembly Accession GCA_001320045.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,007
Refseq Category na
Seq Rel Date 2015/10/04
Spanned Gaps 0
Species Taxid 1661032
SSU Count 1
Submitter National Institute of Technology and Evaluation
Taxid 1661032
Total Gap Length 0
Translation Table 11
tRNA Count (total) 61
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master BCAT00000000.1