Pseudomonas_E hunanensis
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas_E; s__Pseudomonas_E hunanensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas sp. GTC 16482
NCBI Strain Identifiers GTC 16482
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003671955.1)
Genome Characteristics
CheckM Completeness 99.97%
CheckM Contamination 2.44%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 2
tRNA Count 19
Contig Count 292
N50 Contigs 44,653 bp
Longest Contig 172,650 bp
Scaffold Count 292
N50 Scaffolds 44,653 bp
Longest Scaffold 172,650 bp
Genome Size 6,764,392 bp
Protein Count 6,482
Coding Density 89.03%
GC Percentage 61.52%
Ambiguous Bases N/A
GTDB representative GCA_003671955.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM131999v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00031684
Country None
Date 2015-10-4
Genbank Assembly Accession GCA_001319995.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,527
Refseq Category na
Seq Rel Date 2015/10/04
Spanned Gaps 0
Species Taxid 1661693
SSU Count 2
Submitter National Institute of Technology and Evaluation
Taxid 1661693
Total Gap Length 0
Translation Table 11
tRNA Count (total) 62
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master BCAS00000000.1