Enterococcus_E cecorum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus_E; s__Enterococcus_E cecorum
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus cecorum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Enterococcaceae; g__Enterococcus; s__Enterococcus cecorum
NCBI Strain Identifiers SA3
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000407565.1)
Genome Characteristics
CheckM Completeness 99.17%
CheckM Contamination 0.66%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 193
N50 Contigs 128,731 bp
Longest Contig 261,845 bp
Scaffold Count 1
N50 Scaffolds 2,320,599 bp
Longest Scaffold 2,320,599 bp
Genome Size 2,320,599 bp
Protein Count 2,241
Coding Density 84.36%
GC Percentage 36.26%
Ambiguous Bases 35
GTDB representative GCA_000407565.1
GTDB representative of species False
NCBI Metadata
Assembly Level Chromosome
Assembly Name ASM131840v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03203014
Country USA: North Carolina
Date 2015-10-16
Genbank Assembly Accession GCA_001318405.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source spinal lesions
Latitude Longitude None
Molecule Count 1
CDS Count 2,336
Refseq Category representative genome
Seq Rel Date 2015/10/16
Spanned Gaps 192
Species Taxid 44008
SSU Count 1
Submitter NC State University
Taxid 44008
Total Gap Length 17675
Translation Table 11
tRNA Count (total) 55
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None