Serratia marcescens_I
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Serratia; s__Serratia marcescens_I
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Serratia; s__Serratia marcescens
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Serratia; s__Serratia marcescens; sb__Serratia marcescens subsp. marcescens
NCBI Strain Identifiers 945174350
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003186475.1)
Genome Characteristics
CheckM Completeness 99.86%
CheckM Contamination 1.23%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 179
N50 Contigs 119,029 bp
Longest Contig 269,354 bp
Scaffold Count 179
N50 Scaffolds 119,029 bp
Longest Scaffold 269,354 bp
Genome Size 5,792,167 bp
Protein Count 5,487
Coding Density 86.56%
GC Percentage 58.79%
Ambiguous Bases N/A
GTDB representative GCA_003186475.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name 59_S30v.02
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04011458
Country South Africa: Durban
Date 2016-07-28
Genbank Assembly Accession GCA_001317425.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude 29.83432 S 30.99865 E
Molecule Count N/A
CDS Count 5,737
Refseq Category na
Seq Rel Date 2016/07/28
Spanned Gaps 0
Species Taxid 615
SSU Count 4
Submitter University of KwaZulu Natal
Taxid 211759
Total Gap Length 0
Translation Table 11
tRNA Count (total) 84
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LJEX00000000.2