Klebsiella_A michiganensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella_A; s__Klebsiella_A michiganensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella michiganensis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella michiganensis
NCBI Strain Identifiers ST170:939742031
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002925905.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.65%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 1
23S Count 5
tRNA Count 20
Contig Count 176
N50 Contigs 127,698 bp
Longest Contig 315,109 bp
Scaffold Count 176
N50 Scaffolds 127,698 bp
Longest Scaffold 315,109 bp
Genome Size 6,195,993 bp
Protein Count 5,836
Coding Density 87.78%
GC Percentage 55.68%
Ambiguous Bases N/A
GTDB representative GCA_002925905.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM131724v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04011463
Country South Africa: Durban
Date 2016-09-20
Genbank Assembly Accession GCA_001317245.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude 29.83432 S 30.99865 E
Molecule Count N/A
CDS Count 5,979
Refseq Category na
Seq Rel Date 2016/09/20
Spanned Gaps 0
Species Taxid 1134687
SSU Count 7
Submitter University of KwaZulu Natal
Taxid 1134687
Total Gap Length 0
Translation Table 11
tRNA Count (total) 82
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LJFC00000000.2