Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae; sb__Klebsiella pneumoniae subsp. pneumoniae
NCBI Strain Identifiers ST101:939996824
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.33%
CheckM Strain Heterogeneity 0.0
5S Count 11
16S Count 1
23S Count 3
tRNA Count 20
Contig Count 152
N50 Contigs 114,694 bp
Longest Contig 370,643 bp
Scaffold Count 152
N50 Scaffolds 114,694 bp
Longest Scaffold 370,643 bp
Genome Size 5,749,083 bp
Protein Count 5,460
Coding Density 87.49%
GC Percentage 56.99%
Ambiguous Bases N/A
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name 52_S26v.02
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04011454
Country South Africa: Durban
Date 2016-7-28
Genbank Assembly Accession GCA_001317165.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source pus
Latitude Longitude 29.83432 S 30.99865 E
Molecule Count N/A
CDS Count 5,859
Refseq Category na
Seq Rel Date 2016/07/28
Spanned Gaps 0
Species Taxid 573
SSU Count 5
Submitter University of KwaZulu Natal
Taxid 72407
Total Gap Length 0
Translation Table 11
tRNA Count (total) 85
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LJEU00000000.2