Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae; sb__Klebsiella pneumoniae subsp. pneumoniae
NCBI Strain Identifiers ST14:944535499
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 99.7%
CheckM Contamination 0.48%
CheckM Strain Heterogeneity 0.0
5S Count 10
16S Count 1
23S Count 3
tRNA Count 20
Contig Count 130
N50 Contigs 143,505 bp
Longest Contig 367,575 bp
Scaffold Count 130
N50 Scaffolds 143,505 bp
Longest Scaffold 367,575 bp
Genome Size 5,738,409 bp
Protein Count 5,371
Coding Density 87.64%
GC Percentage 56.84%
Ambiguous Bases N/A
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM131686v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04011430
Country South Africa: Durban
Date 2016-7-28
Genbank Assembly Accession GCA_001316865.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude 29.83432 S 30.99865 E
Molecule Count N/A
CDS Count 5,766
Refseq Category na
Seq Rel Date 2016/07/28
Spanned Gaps 0
Species Taxid 573
SSU Count 6
Submitter University of KwaZulu Natal
Taxid 72407
Total Gap Length 0
Translation Table 11
tRNA Count (total) 81
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LJDW00000000.2