Enterobacter himalayensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Enterobacter; s__Enterobacter himalayensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Enterobacter; s__Enterobacter hormaechei
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Enterobacter; x__Enterobacter cloacae complex; s__Enterobacter hormaechei
NCBI Strain Identifiers ST108:941726609
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002003685.1)
Genome Characteristics
CheckM Completeness 99.92%
CheckM Contamination 1.82%
CheckM Strain Heterogeneity 54.55
5S Count 16
16S Count 19
23S Count 19
tRNA Count 20
Contig Count 340
N50 Contigs 83,609 bp
Longest Contig 294,802 bp
Scaffold Count 340
N50 Scaffolds 83,609 bp
Longest Scaffold 294,802 bp
Genome Size 5,288,220 bp
Protein Count 5,223
Coding Density 88.20%
GC Percentage 54.71%
Ambiguous Bases 138
GTDB representative GCA_002003685.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM131661v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04011429
Country South Africa: Durban
Date 2015-10-15
Genbank Assembly Accession GCA_001316615.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude 29.83432 S 30.99865 E
Molecule Count N/A
CDS Count 5,317
Refseq Category na
Seq Rel Date 2015/10/15
Spanned Gaps 0
Species Taxid 158836
SSU Count 23
Submitter University of KwaZulu Natal
Taxid 158836
Total Gap Length 0
Translation Table 11
tRNA Count (total) 96
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LJDV00000000.1