Caloranaerobacter sp001316435
Isolate HQ 5S/16S/23S 10 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Tissierellales; f__Caloranaerobacteraceae; g__Caloranaerobacter; s__Caloranaerobacter sp001316435
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Caloranaerobacter; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Caloranaerobacter; s__Caloranaerobacter sp. TR13
NCBI Strain Identifiers TR13
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 98.6%
CheckM Contamination 0.58%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 10
Contig Count 52
N50 Contigs 259,980 bp
Longest Contig 644,929 bp
Scaffold Count 52
N50 Scaffolds 259,980 bp
Longest Scaffold 644,929 bp
Genome Size 2,261,881 bp
Protein Count 2,204
Coding Density 88.76%
GC Percentage 29.52%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM131643v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03283895
Country None
Date 2015-10-15
Genbank Assembly Accession GCA_001316435.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source surface sediment from deep-sea hydrothermal field
Latitude Longitude 3.10 S 102.55 W
Molecule Count N/A
CDS Count 2,159
Refseq Category na
Seq Rel Date 2015/10/15
Spanned Gaps 0
Species Taxid 1302151
SSU Count 1
Submitter Third Institute of Oceanography, State Oceanic Administration
Taxid 1302151
Total Gap Length 0
Translation Table 11
tRNA Count (total) 21
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JXLL00000000.1