Taxonomic Information
GTDB Taxonomy d__Archaea; p__Thermoproteota; c__Thermoproteia; o__Desulfurococcales; f__Acidilobaceae; g__Aeropyrum; s__Aeropyrum camini
Filtered NCBI Taxonomy d__Archaea; p__Crenarchaeota; c__Thermoprotei; o__Desulfurococcales; f__Desulfurococcaceae; g__Aeropyrum; s__Aeropyrum camini
Unfiltered NCBI Taxonomy d__Archaea; x__TACK group; p__Crenarchaeota; c__Thermoprotei; o__Desulfurococcales; f__Desulfurococcaceae; g__Aeropyrum; s__Aeropyrum camini; x__Aeropyrum camini SY1 = JCM 12091
NCBI Strain Identifiers JCM 12091
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_000591035.1)
Genome Characteristics
CheckM Completeness 94.81%
CheckM Contamination 0.7%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 2
tRNA Count 18
Contig Count 41
N50 Contigs 95,999 bp
Longest Contig 148,659 bp
Scaffold Count 41
N50 Scaffolds 95,999 bp
Longest Scaffold 148,659 bp
Genome Size 1,591,049 bp
Protein Count 2,099
Coding Density 86.90%
GC Percentage 56.70%
Ambiguous Bases N/A
GTDB representative GCA_000591035.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM131606v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00000424
Country None
Date 2015-10-1
Genbank Assembly Accession GCA_001316065.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,849
Refseq Category representative genome
Seq Rel Date 2015/10/01
Spanned Gaps 0
Species Taxid 229980
SSU Count 1
Submitter The University of Tokyo
Taxid 1198449
Total Gap Length 0
Translation Table 11
tRNA Count (total) 44
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master BBBZ00000000.1