Methanogenium cariaci
Isolate MQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Archaea; p__Halobacteriota; c__Methanomicrobia; o__Methanomicrobiales; f__Methanomicrobiaceae; g__Methanogenium; s__Methanogenium cariaci
Filtered NCBI Taxonomy d__Archaea; p__Euryarchaeota; c__Methanomicrobia; o__Methanomicrobiales; f__Methanomicrobiaceae; g__Methanogenium; s__Methanogenium cariaci
Unfiltered NCBI Taxonomy d__Archaea; p__Euryarchaeota; x__Stenosarchaea group; c__Methanomicrobia; o__Methanomicrobiales; f__Methanomicrobiaceae; g__Methanogenium; s__Methanogenium cariaci; x__Methanogenium cariaci JCM 10550
NCBI Strain Identifiers JCM 10550
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 85.25%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 52
N50 Contigs 103,086 bp
Longest Contig 354,735 bp
Scaffold Count 52
N50 Scaffolds 103,086 bp
Longest Scaffold 354,735 bp
Genome Size 2,686,643 bp
Protein Count 4,256
Coding Density 82.71%
GC Percentage 52.06%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM131594v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00000408
Country None
Date 2015-10-1
Genbank Assembly Accession GCA_001315945.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,236
Refseq Category representative genome
Seq Rel Date 2015/10/01
Spanned Gaps 0
Species Taxid 2197
SSU Count 1
Submitter The University of Tokyo
Taxid 1293041
Total Gap Length 0
Translation Table 11
tRNA Count (total) 45
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master BBBG00000000.1