Paenibacillus sp001315105
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Paenibacillales; f__Paenibacillaceae; g__Paenibacillus; s__Paenibacillus sp001315105
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Paenibacillaceae; g__Paenibacillus; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Paenibacillaceae; g__Paenibacillus; s__Paenibacillus sp. JCM 10914
NCBI Strain Identifiers JCM 10914
GTDB Type Material Designation not type material
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 95.64%
CheckM Contamination 0.44%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 2
tRNA Count 19
Contig Count 95
N50 Contigs 153,857 bp
Longest Contig 706,562 bp
Scaffold Count 95
N50 Scaffolds 153,857 bp
Longest Scaffold 706,562 bp
Genome Size 6,112,248 bp
Protein Count 6,340
Coding Density 87.54%
GC Percentage 48.60%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM131510v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00000412
Country None
Date 2015-10-2
Genbank Assembly Accession GCA_001315105.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,597
Refseq Category na
Seq Rel Date 2015/10/02
Spanned Gaps 0
Species Taxid 1236974
SSU Count 1
Submitter The University of Tokyo
Taxid 1236974
Total Gap Length 0
Translation Table 11
tRNA Count (total) 68
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master BAZR00000000.1