Apilactobacillus kunkeei
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Apilactobacillus; s__Apilactobacillus kunkeei
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus kunkeei
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus kunkeei
NCBI Strain Identifiers MP2
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001281265.1)
Genome Characteristics
CheckM Completeness 98.07%
CheckM Contamination 2.29%
CheckM Strain Heterogeneity 60.0
5S Count 5
16S Count 5
23S Count 5
tRNA Count 20
Contig Count 1
N50 Contigs 1,614,522 bp
Longest Contig 1,614,522 bp
Scaffold Count 1
N50 Scaffolds 1,614,522 bp
Longest Scaffold 1,614,522 bp
Genome Size 1,614,522 bp
Protein Count 1,469
Coding Density 88.99%
GC Percentage 36.86%
Ambiguous Bases N/A
GTDB representative GCA_001281265.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM131494v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04157996
Country Chile: Melipilla
Date 2015-10-14
Genbank Assembly Accession GCA_001314945.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source gut
Latitude Longitude None
Molecule Count 1
CDS Count 1,473
Refseq Category representative genome
Seq Rel Date 2015/10/14
Spanned Gaps 0
Species Taxid 148814
SSU Count 5
Submitter Universidad Mayor
Taxid 148814
Total Gap Length 0
Translation Table 11
tRNA Count (total) 66
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None