Campylobacter_D jejuni
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter_D; s__Campylobacter_D jejuni
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter jejuni
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter jejuni
NCBI Strain Identifiers RM1285
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457695.1)
Genome Characteristics
CheckM Completeness 99.53%
CheckM Contamination 0.11%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 1
N50 Contigs 1,635,803 bp
Longest Contig 1,635,803 bp
Scaffold Count 1
N50 Scaffolds 1,635,803 bp
Longest Scaffold 1,635,803 bp
Genome Size 1,635,803 bp
Protein Count 1,664
Coding Density 93.69%
GC Percentage 30.54%
Ambiguous Bases N/A
GTDB representative GCA_001457695.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM131428v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04054191
Country USA: Albany CA
Date 2015-10-14
Genbank Assembly Accession GCA_001314285.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Exudate from chicken breast purchased at a retail location
Latitude Longitude 37.89 N 122.30 W
Molecule Count 1
CDS Count 1,652
Refseq Category na
Seq Rel Date 2015/10/14
Spanned Gaps 0
Species Taxid 197
SSU Count 3
Submitter USDA-Agricultural Research Service-Eastern Regional Research Center
Taxid 197
Total Gap Length 0
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None