Microbacterium sp001314225
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Microbacteriaceae; g__Microbacterium; s__Microbacterium sp001314225
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Microbacteriaceae; g__Microbacterium; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Microbacteriaceae; g__Microbacterium; s__Microbacterium sp. No. 7
NCBI Strain Identifiers No. 7
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 98.7%
CheckM Contamination 2.02%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 3
N50 Contigs 4,599,046 bp
Longest Contig 4,599,046 bp
Scaffold Count 3
N50 Scaffolds 4,599,046 bp
Longest Scaffold 4,599,046 bp
Genome Size 4,827,965 bp
Protein Count 4,518
Coding Density 90.51%
GC Percentage 71.01%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM131422v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04046238
Country Japan: Kyoto
Date 2015-10-14
Genbank Assembly Accession GCA_001314225.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source activated sludge
Latitude Longitude None
Molecule Count 3
CDS Count 4,464
Refseq Category na
Seq Rel Date 2015/10/14
Spanned Gaps 0
Species Taxid 1714373
SSU Count 2
Submitter Kyoto Institute of Technology
Taxid 1714373
Total Gap Length 0
Translation Table 11
tRNA Count (total) 48
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None