Citromicrobium bathyomarinum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Citromicrobium; s__Citromicrobium bathyomarinum
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Citromicrobium; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Citromicrobium; s__Citromicrobium sp. WPS32
NCBI Strain Identifiers WPS32
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000176355.1)
Genome Characteristics
CheckM Completeness 99.59%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 16
N50 Contigs 297,567 bp
Longest Contig 901,123 bp
Scaffold Count 16
N50 Scaffolds 297,567 bp
Longest Scaffold 901,123 bp
Genome Size 3,161,114 bp
Protein Count 3,059
Coding Density 91.31%
GC Percentage 64.94%
Ambiguous Bases N/A
GTDB representative GCA_000176355.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM130629v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03438112
Country China
Date 2015-10-2
Genbank Assembly Accession GCA_001306295.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Sea water
Latitude Longitude None
Molecule Count N/A
CDS Count 3,035
Refseq Category na
Seq Rel Date 2015/10/02
Spanned Gaps 0
Species Taxid 1634517
SSU Count 1
Submitter Xiamen University
Taxid 1634517
Total Gap Length 0
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LAPS00000000.1