Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Chloroflexota; c__Chloroflexia; o__Chloroflexales; f__Herpetosiphonaceae; g__Herpetosiphon; s__Herpetosiphon geysericola
Filtered NCBI Taxonomy d__Bacteria; p__Chloroflexi; c__Chloroflexia; o__Herpetosiphonales; f__Herpetosiphonaceae; g__Herpetosiphon; s__Herpetosiphon geysericola
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Chloroflexi; c__Chloroflexia; o__Herpetosiphonales; f__Herpetosiphonaceae; g__Herpetosiphon; s__Herpetosiphon geysericola
NCBI Strain Identifiers DSM 7119
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.09%
CheckM Contamination 0.91%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 0
23S Count 0
tRNA Count 19
Contig Count 46
N50 Contigs 281,525 bp
Longest Contig 661,236 bp
Scaffold Count 46
N50 Scaffolds 281,525 bp
Longest Scaffold 661,236 bp
Genome Size 6,140,412 bp
Protein Count 5,445
Coding Density 87.97%
GC Percentage 50.75%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM130613v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03274862
Country Mexico: Baja California
Date 2015-10-2
Genbank Assembly Accession GCA_001306135.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Hotspring
Latitude Longitude None
Molecule Count N/A
CDS Count 5,288
Refseq Category representative genome
Seq Rel Date 2015/10/02
Spanned Gaps 0
Species Taxid 70996
SSU Count 2
Submitter California Institute of Technology
Taxid 70996
Total Gap Length 0
Translation Table 11
tRNA Count (total) 47
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master LGKP00000000.1