Actibacterium sp001305615
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Actibacterium; s__Actibacterium sp001305615
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Confluentimicrobium; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Confluentimicrobium; s__Confluentimicrobium sp. EMB200-NS6
NCBI Strain Identifiers EMB200-NS6
GTDB Type Material Designation not type material
GTDB Representative of Species True (3 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.39%
CheckM Contamination 1.18%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 19
Contig Count 4
N50 Contigs 3,649,316 bp
Longest Contig 3,649,316 bp
Scaffold Count 4
N50 Scaffolds 3,649,316 bp
Longest Scaffold 3,649,316 bp
Genome Size 4,147,426 bp
Protein Count 4,018
Coding Density 90.63%
GC Percentage 64.10%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM130561v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03323603
Country Korea
Date 2015-10-2
Genbank Assembly Accession GCA_001305615.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source oil contaminated tidal flat
Latitude Longitude 36.47 N 126.08 E
Molecule Count 4
CDS Count 4,004
Refseq Category na
Seq Rel Date 2015/10/02
Spanned Gaps 0
Species Taxid 1609966
SSU Count 2
Submitter ChungAng University
Taxid 1609966
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None