Salmonella enterica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Enteritidis
NCBI Strain Identifiers FORC_007
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.13%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 7
23S Count 7
tRNA Count 20
Contig Count 2
N50 Contigs 4,680,477 bp
Longest Contig 4,680,477 bp
Scaffold Count 2
N50 Scaffolds 4,680,477 bp
Longest Scaffold 4,680,477 bp
Genome Size 4,781,905 bp
Protein Count 4,485
Coding Density 86.81%
GC Percentage 52.10%
Ambiguous Bases 1
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM130523v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03140319
Country South Korea: Gyeongbuk
Date 2015-10-1
Genbank Assembly Accession GCA_001305235.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source steamed conch
Latitude Longitude 36.14 N 127.31 E
Molecule Count 2
CDS Count 4,768
Refseq Category na
Seq Rel Date 2015/10/01
Spanned Gaps 0
Species Taxid 28901
SSU Count 7
Submitter Food-borne Pathogen Omics Research Center, FORC
Taxid 149539
Total Gap Length 0
Translation Table 11
tRNA Count (total) 84
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None