Bifidobacterium globosum
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium globosum
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__; f__; g__; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; x__unclassified Actinobacteria (class); x__unclassified Actinobacteria (class) (miscellaneous); s__Actinobacteria bacterium UC5.1-1B11
NCBI Strain Identifiers UC5.1-1B11
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000741295.1)
Genome Characteristics
CheckM Completeness 91.49%
CheckM Contamination 1.69%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 343
N50 Contigs 14,655 bp
Longest Contig 54,989 bp
Scaffold Count 343
N50 Scaffolds 14,655 bp
Longest Scaffold 54,989 bp
Genome Size 2,069,659 bp
Protein Count 2,615
Coding Density 86.02%
GC Percentage 63.10%
Ambiguous Bases N/A
GTDB representative GCA_000741295.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM130519v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00036519
Country None
Date 2015-9-25
Genbank Assembly Accession GCA_001305195.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,022
Refseq Category na
Seq Rel Date 2015/09/25
Spanned Gaps 0
Species Taxid 1697797
SSU Count 1
Submitter Laboratory of Metagenomics, Graduate School of Frontier Sciences, The University of Tokyo
Taxid 1697797
Total Gap Length 0
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master BCAE00000000.1