Yersinia enterocolitica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Yersinia; s__Yersinia enterocolitica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia enterocolitica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia enterocolitica
NCBI Strain Identifiers FORC-002
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_901472495.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.37%
CheckM Strain Heterogeneity 75.0
5S Count 8
16S Count 9
23S Count 9
tRNA Count 20
Contig Count 2
N50 Contigs 4,735,534 bp
Longest Contig 4,735,534 bp
Scaffold Count 2
N50 Scaffolds 4,735,534 bp
Longest Scaffold 4,735,534 bp
Genome Size 4,837,316 bp
Protein Count 4,344
Coding Density 85.68%
GC Percentage 47.04%
Ambiguous Bases N/A
GTDB representative GCA_901472495.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM130475v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03078687
Country South Korea
Date 2015-10-1
Genbank Assembly Accession GCA_001304755.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Food
Latitude Longitude 43.00 N 124.00 E
Molecule Count 2
CDS Count 4,374
Refseq Category na
Seq Rel Date 2015/10/01
Spanned Gaps 0
Species Taxid 630
SSU Count 9
Submitter Seoul National Univerisity
Taxid 630
Total Gap Length 0
Translation Table 11
tRNA Count (total) 81
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None