Salmonella enterica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Typhi
NCBI Strain Identifiers 13;PM016/13;PM016
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.04%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 7
23S Count 7
tRNA Count 20
Contig Count 1
N50 Contigs 4,793,553 bp
Longest Contig 4,793,553 bp
Scaffold Count 1
N50 Scaffolds 4,793,553 bp
Longest Scaffold 4,793,553 bp
Genome Size 4,793,553 bp
Protein Count 4,638
Coding Density 86.77%
GC Percentage 52.03%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM130260v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03765654
Country Malaysia:Kelantan
Date 2015-9-29
Genbank Assembly Accession GCA_001302605.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Well water
Latitude Longitude None
Molecule Count 1
CDS Count 4,866
Refseq Category na
Seq Rel Date 2015/09/29
Spanned Gaps 0
Species Taxid 28901
SSU Count 7
Submitter Universiti Sains Malaysia
Taxid 90370
Total Gap Length 0
Translation Table 11
tRNA Count (total) 78
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None