Glutamicibacter halophytocola
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Micrococcaceae; g__Glutamicibacter; s__Glutamicibacter halophytocola
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Micrococcaceae; g__Glutamicibacter; s__Glutamicibacter halophytocola
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Micrococcaceae; g__Glutamicibacter; s__Glutamicibacter halophytocola
NCBI Strain Identifiers KLBMP 5180
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 1.03%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 2
N50 Contigs 3,911,798 bp
Longest Contig 3,911,798 bp
Scaffold Count 2
N50 Scaffolds 3,911,798 bp
Longest Scaffold 3,911,798 bp
Genome Size 3,918,424 bp
Protein Count 3,616
Coding Density 87.99%
GC Percentage 59.99%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM130256v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03840760
Country China:Jiangsu
Date 2015-9-29
Genbank Assembly Accession GCA_001302565.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Inner tissues of halophyte Limonium sinense (Girard) Kuntze
Latitude Longitude None
Molecule Count 2
CDS Count 3,545
Refseq Category representative genome
Seq Rel Date 2015/09/29
Spanned Gaps 0
Species Taxid 1933880
SSU Count 6
Submitter Jiangsu Normal University
Taxid 1933880
Total Gap Length 0
Translation Table 11
tRNA Count (total) 65
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None