Helicobacter_D pullorum
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter_D; s__Helicobacter_D pullorum
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pullorum
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pullorum
NCBI Strain Identifiers 12;229254;229254/12
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000155495.1)
Genome Characteristics
CheckM Completeness 99.82%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 146
N50 Contigs 49,863 bp
Longest Contig 150,947 bp
Scaffold Count 138
N50 Scaffolds 55,776 bp
Longest Scaffold 193,459 bp
Genome Size 1,814,776 bp
Protein Count 1,890
Coding Density 92.64%
GC Percentage 34.23%
Ambiguous Bases N/A
GTDB representative GCA_000155495.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM129951v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02840986
Country Portugal
Date 2015-9-28
Genbank Assembly Accession GCA_001299515.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source fresh chicken meat
Latitude Longitude 38.7647 N 9.1648 W
Molecule Count 2
CDS Count 1,856
Refseq Category na
Seq Rel Date 2015/09/28
Spanned Gaps 8
Species Taxid 35818
SSU Count 1
Submitter National Institute of Health, Portugal
Taxid 35818
Total Gap Length 154
Translation Table 11
tRNA Count (total) 36
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JNOA00000000.1