Streptomyces mirabilis_B
Isolate MQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces mirabilis_B
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__; f__; g__; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; x__unclassified Actinobacteria (class); x__unclassified Actinobacteria (class) (miscellaneous); s__Actinobacteria bacterium OK006
NCBI Strain Identifiers OK006
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_007113665.1)
Genome Characteristics
CheckM Completeness 79.31%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 2
23S Count 1
tRNA Count 20
Contig Count 291
N50 Contigs 127,544 bp
Longest Contig 567,136 bp
Scaffold Count 291
N50 Scaffolds 127,544 bp
Longest Scaffold 567,136 bp
Genome Size 11,932,666 bp
Protein Count 10,879
Coding Density 85.41%
GC Percentage 70.14%
Ambiguous Bases N/A
GTDB representative GCA_007113665.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Actinobacteria.strain_OK006_v1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03275747
Country USA: Clatskanie; Oregon
Date 2015-09-24
Genbank Assembly Accession GCA_001298565.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Endosphere of plant Populus trichocarpa
Latitude Longitude None
Molecule Count N/A
CDS Count 10,913
Refseq Category na
Seq Rel Date 2015/09/24
Spanned Gaps 0
Species Taxid 1592326
SSU Count 2
Submitter Oak Ridge National Lab
Taxid 1592326
Total Gap Length 0
Translation Table 11
tRNA Count (total) 74
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LJCU00000000.1