Staphylococcus hominis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus hominis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus hominis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus hominis
NCBI Strain Identifiers RIT-PI-k
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002901845.1)
Genome Characteristics
CheckM Completeness 99.32%
CheckM Contamination 0.57%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 103
N50 Contigs 254,527 bp
Longest Contig 691,480 bp
Scaffold Count 103
N50 Scaffolds 254,527 bp
Longest Scaffold 691,480 bp
Genome Size 2,301,324 bp
Protein Count 2,290
Coding Density 87.14%
GC Percentage 31.57%
Ambiguous Bases N/A
GTDB representative GCA_002901845.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM129710v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03895993
Country USA: Rochester; NY
Date 2015-9-22
Genbank Assembly Accession GCA_001297105.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source internal stem tissue
Latitude Longitude None
Molecule Count N/A
CDS Count 2,257
Refseq Category na
Seq Rel Date 2015/09/22
Spanned Gaps 0
Species Taxid 1290
SSU Count 1
Submitter Monash University Malaysia
Taxid 1290
Total Gap Length 0
Translation Table 11
tRNA Count (total) 60
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LHPB00000000.1