Mycobacterium immunogenum
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__Mycobacterium immunogenum
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacteroides; s__Mycobacteroides immunogenum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacteroides; s__Mycobacteroides immunogenum
NCBI Strain Identifiers H113
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001605725.1)
Genome Characteristics
CheckM Completeness 99.61%
CheckM Contamination 2.15%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 92
N50 Contigs 139,912 bp
Longest Contig 380,783 bp
Scaffold Count 92
N50 Scaffolds 139,912 bp
Longest Scaffold 380,783 bp
Genome Size 5,759,306 bp
Protein Count 5,876
Coding Density 92.28%
GC Percentage 64.03%
Ambiguous Bases N/A
GTDB representative GCA_001605725.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM129640v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04025500
Country USA: Cincinnati; Ohio
Date 2015-09-22
Genbank Assembly Accession GCA_001296405.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Drinking Water
Latitude Longitude None
Molecule Count N/A
CDS Count 5,787
Refseq Category na
Seq Rel Date 2015/09/22
Spanned Gaps 0
Species Taxid 83262
SSU Count 1
Submitter US EPA
Taxid 83262
Total Gap Length 0
Translation Table 11
tRNA Count (total) 64
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LJFW00000000.1