Marinagarivorans algicola
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Cellvibrionaceae; g__Marinagarivorans; s__Marinagarivorans algicola
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Cellvibrionales; f__Cellvibrionaceae; g__Marinagarivorans; s__Marinagarivorans algicola
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Cellvibrionales; f__Cellvibrionaceae; g__Marinagarivorans; s__Marinagarivorans algicola
NCBI Strain Identifiers JL1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001292705.1)
Genome Characteristics
CheckM Completeness 99.86%
CheckM Contamination 0.3%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 79
N50 Contigs 116,988 bp
Longest Contig 302,602 bp
Scaffold Count 79
N50 Scaffolds 116,988 bp
Longest Scaffold 302,602 bp
Genome Size 4,020,832 bp
Protein Count 3,254
Coding Density 84.95%
GC Percentage 45.08%
Ambiguous Bases N/A
GTDB representative GCA_001292705.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM129622v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03840795
Country China: Weihai
Date 2015-9-22
Genbank Assembly Accession GCA_001296225.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source coastal area
Latitude Longitude None
Molecule Count N/A
CDS Count 3,276
Refseq Category na
Seq Rel Date 2015/09/22
Spanned Gaps 0
Species Taxid 1513270
SSU Count 2
Submitter Shandong University at Weihai
Taxid 1513270
Total Gap Length 0
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LFYV00000000.1