Brevundimonas sp001295975
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Caulobacterales; f__Caulobacteraceae; g__Brevundimonas; s__Brevundimonas sp001295975
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Caulobacterales; f__Caulobacteraceae; g__Brevundimonas; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Caulobacterales; f__Caulobacteraceae; g__Brevundimonas; s__Brevundimonas sp. AAP58
NCBI Strain Identifiers AAP58
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.43%
CheckM Strain Heterogeneity 50.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 138
N50 Contigs 37,822 bp
Longest Contig 134,109 bp
Scaffold Count 138
N50 Scaffolds 37,822 bp
Longest Scaffold 134,109 bp
Genome Size 2,966,829 bp
Protein Count 2,988
Coding Density 90.87%
GC Percentage 67.73%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM129597v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02927139
Country China: Yinchuan City
Date 2015-9-22
Genbank Assembly Accession GCA_001295975.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source freshwater lake
Latitude Longitude 38.817154 N 106.340535 E
Molecule Count N/A
CDS Count 2,964
Refseq Category na
Seq Rel Date 2015/09/22
Spanned Gaps 0
Species Taxid 1523422
SSU Count 1
Submitter Institute of Microbiology, ASCR
Taxid 1523422
Total Gap Length 0
Translation Table 11
tRNA Count (total) 43
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LJHU00000000.1