Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Blastomonas; s__Blastomonas fulva
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Blastomonas; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Sphingomonadales; f__Sphingomonadaceae; g__Blastomonas; s__Blastomonas sp. AAP25
NCBI Strain Identifiers AAP25
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003431825.1)
Genome Characteristics
CheckM Completeness 99.54%
CheckM Contamination 1.19%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 51
N50 Contigs 330,517 bp
Longest Contig 604,990 bp
Scaffold Count 51
N50 Scaffolds 330,517 bp
Longest Scaffold 604,990 bp
Genome Size 4,145,010 bp
Protein Count 3,936
Coding Density 90.89%
GC Percentage 64.22%
Ambiguous Bases N/A
GTDB representative GCA_003431825.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM129596v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02925438
Country Czech Republic: Trebon
Date 2015-9-22
Genbank Assembly Accession GCA_001295965.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source freshwater lake
Latitude Longitude 48.986963 N 14.749342 E
Molecule Count N/A
CDS Count 3,917
Refseq Category na
Seq Rel Date 2015/09/22
Spanned Gaps 0
Species Taxid 1523416
SSU Count 1
Submitter Institute of Microbiology, ASCR
Taxid 1523416
Total Gap Length 0
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LJHP00000000.1