Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__AAP99; s__AAP99 sp001295775
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__; f__; g__; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; x__unclassified Betaproteobacteria; x__unclassified Betaproteobacteria (miscellaneous); s__beta proteobacterium AAP99
NCBI Strain Identifiers AAP99
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.36%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 31
N50 Contigs 213,696 bp
Longest Contig 523,714 bp
Scaffold Count 31
N50 Scaffolds 213,696 bp
Longest Scaffold 523,714 bp
Genome Size 3,858,517 bp
Protein Count 3,484
Coding Density 89.04%
GC Percentage 65.41%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM129577v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02927146
Country China: Zhanjiang City
Date 2015-9-22
Genbank Assembly Accession GCA_001295775.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source freshwater lake
Latitude Longitude 21.143 N 110.279 E
Molecule Count N/A
CDS Count 3,451
Refseq Category na
Seq Rel Date 2015/09/22
Spanned Gaps 0
Species Taxid 1523428
SSU Count 1
Submitter Institute of Microbiology, ASCR
Taxid 1523428
Total Gap Length 0
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LJIA00000000.1