Pseudomonas_E versuta
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas_E; s__Pseudomonas_E versuta
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas versuta
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas versuta
NCBI Strain Identifiers L10.10
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (3 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.5%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 8
23S Count 8
tRNA Count 20
Contig Count 1
N50 Contigs 5,149,788 bp
Longest Contig 5,149,788 bp
Scaffold Count 1
N50 Scaffolds 5,149,788 bp
Longest Scaffold 5,149,788 bp
Genome Size 5,149,788 bp
Protein Count 4,662
Coding Density 88.21%
GC Percentage 58.23%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM129457v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04076495
Country Antarctica
Date 2015-9-18
Genbank Assembly Accession GCA_001294575.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude None
Molecule Count 1
CDS Count 4,612
Refseq Category na
Seq Rel Date 2015/09/18
Spanned Gaps 0
Species Taxid 1788301
SSU Count 8
Submitter University of Malaya
Taxid 1788301
Total Gap Length 0
Translation Table 11
tRNA Count (total) 68
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None