Streptococcus suis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus suis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus suis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus suis
NCBI Strain Identifiers ISU2614
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000294495.1)
Genome Characteristics
CheckM Completeness 98.87%
CheckM Contamination 0.5%
CheckM Strain Heterogeneity 100.0
5S Count 3
16S Count 3
23S Count 1
tRNA Count 20
Contig Count 124
N50 Contigs 25,453 bp
Longest Contig 89,740 bp
Scaffold Count 124
N50 Scaffolds 25,453 bp
Longest Scaffold 89,740 bp
Genome Size 2,112,543 bp
Protein Count 2,198
Coding Density 87.58%
GC Percentage 41.29%
Ambiguous Bases 198
GTDB representative GCA_000294495.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Ssuis26-14_v1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03485886
Country USA: Iowa
Date 2015-9-17
Genbank Assembly Accession GCA_001293215.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source respiratory tract
Latitude Longitude None
Molecule Count N/A
CDS Count 2,232
Refseq Category na
Seq Rel Date 2015/09/17
Spanned Gaps 0
Species Taxid 1307
SSU Count 3
Submitter USDA-ARS
Taxid 1307
Total Gap Length 0
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LDOI00000000.1