Leptospira interrogans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Leptospirae; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira interrogans; x__Leptospira interrogans serovar Hardjo; x__Leptospira interrogans serovar Hardjo str. Norma
NCBI Strain Identifiers Norma;Cattle
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900156205.1)
Genome Characteristics
CheckM Completeness 96.47%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 2
N50 Contigs 4,406,718 bp
Longest Contig 4,406,718 bp
Scaffold Count 2
N50 Scaffolds 4,406,718 bp
Longest Scaffold 4,406,718 bp
Genome Size 4,762,150 bp
Protein Count 3,884
Coding Density 75.48%
GC Percentage 35.02%
Ambiguous Bases 1
GTDB representative GCA_900156205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM129306v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03853357
Country Brazil
Date 2015-9-17
Genbank Assembly Accession GCA_001293065.1
Genome Category Isolate
Genome Representation full
Isolate Cattle
Isolation Source urine
Latitude Longitude None
Molecule Count 2
CDS Count 4,278
Refseq Category na
Seq Rel Date 2015/09/17
Spanned Gaps 0
Species Taxid 173
SSU Count 2
Submitter Federal University of Minas Gerais
Taxid 1279460
Total Gap Length 0
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None