Marinagarivorans algicola
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Cellvibrionaceae; g__Marinagarivorans; s__Marinagarivorans algicola
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Cellvibrionales; f__Cellvibrionaceae; g__Marinagarivorans; s__Marinagarivorans algicola
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Cellvibrionales; f__Cellvibrionaceae; g__Marinagarivorans; s__Marinagarivorans algicola
NCBI Strain Identifiers Z1
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 98.99%
CheckM Contamination 0.3%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 113
N50 Contigs 90,485 bp
Longest Contig 261,418 bp
Scaffold Count 113
N50 Scaffolds 90,485 bp
Longest Scaffold 261,418 bp
Genome Size 4,057,827 bp
Protein Count 3,263
Coding Density 85.22%
GC Percentage 45.06%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM129270v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03840766
Country China: Weihai
Date 2015-9-16
Genbank Assembly Accession GCA_001292705.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source marine alga from coastal area
Latitude Longitude None
Molecule Count N/A
CDS Count 3,268
Refseq Category representative genome
Seq Rel Date 2015/09/16
Spanned Gaps 0
Species Taxid 1513270
SSU Count 2
Submitter Shandong University at Weihai
Taxid 1513270
Total Gap Length 0
Translation Table 11
tRNA Count (total) 43
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master LGAK00000000.1