Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
NCBI Strain Identifiers 2588STDY5748609
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.64%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 28
N50 Contigs 180,640 bp
Longest Contig 642,987 bp
Scaffold Count 17
N50 Scaffolds 346,367 bp
Longest Scaffold 894,867 bp
Genome Size 2,879,583 bp
Protein Count 2,685
Coding Density 83.69%
GC Percentage 32.62%
Ambiguous Bases 1
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 12673_2#36
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2384543
Country USA
Date 2015-9-5
Genbank Assembly Accession GCA_001290685.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Other
Latitude Longitude None
Molecule Count N/A
CDS Count 2,980
Refseq Category na
Seq Rel Date 2015/09/05
Spanned Gaps 11
Species Taxid 1280
SSU Count 3
Submitter SC
Taxid 1280
Total Gap Length 3042
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CYPC00000000.1