Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
NCBI Strain Identifiers 2588STDY5748941
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.37%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 51
N50 Contigs 211,190 bp
Longest Contig 395,187 bp
Scaffold Count 39
N50 Scaffolds 291,051 bp
Longest Scaffold 414,729 bp
Genome Size 2,889,045 bp
Protein Count 2,750
Coding Density 84.14%
GC Percentage 32.72%
Ambiguous Bases 1
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 12673_5#83
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2384875
Country USA
Date 2015-9-5
Genbank Assembly Accession GCA_001289925.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Respiratory
Latitude Longitude None
Molecule Count N/A
CDS Count 3,036
Refseq Category na
Seq Rel Date 2015/09/05
Spanned Gaps 12
Species Taxid 1280
SSU Count 1
Submitter SC
Taxid 1280
Total Gap Length 3293
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CYOK00000000.1