Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
NCBI Strain Identifiers 2588STDY5748027
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.64%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 30
N50 Contigs 175,555 bp
Longest Contig 582,773 bp
Scaffold Count 16
N50 Scaffolds 610,491 bp
Longest Scaffold 1,073,961 bp
Genome Size 2,877,838 bp
Protein Count 2,676
Coding Density 83.43%
GC Percentage 32.63%
Ambiguous Bases 1
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 12625_5#30
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2383967
Country USA
Date 2015-9-4
Genbank Assembly Accession GCA_001289125.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Wound
Latitude Longitude None
Molecule Count N/A
CDS Count 2,976
Refseq Category na
Seq Rel Date 2015/09/04
Spanned Gaps 14
Species Taxid 1280
SSU Count 1
Submitter SC
Taxid 1280
Total Gap Length 2695
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CYIW00000000.1