Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
NCBI Strain Identifiers 2588STDY5748703
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.64%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 29
N50 Contigs 238,900 bp
Longest Contig 403,955 bp
Scaffold Count 20
N50 Scaffolds 326,273 bp
Longest Scaffold 895,154 bp
Genome Size 2,879,012 bp
Protein Count 2,691
Coding Density 83.75%
GC Percentage 32.62%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 12673_3#35
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2384637
Country USA
Date 2015-9-5
Genbank Assembly Accession GCA_001287885.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Wound
Latitude Longitude None
Molecule Count N/A
CDS Count 2,979
Refseq Category na
Seq Rel Date 2015/09/05
Spanned Gaps 9
Species Taxid 1280
SSU Count 3
Submitter SC
Taxid 1280
Total Gap Length 2482
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CYMQ00000000.1