Niameybacter massiliensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Lachnospirales; f__Cellulosilyticaceae; g__Niameybacter; s__Niameybacter massiliensis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Lachnospiraceae; g__Niameybacter; s__Niameybacter massiliensis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Lachnospiraceae; g__Niameybacter; s__Niameybacter massiliensis
NCBI Strain Identifiers Mt14
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 97.99%
CheckM Contamination 4.25%
CheckM Strain Heterogeneity 0.0
5S Count 12
16S Count 14
23S Count 12
tRNA Count 20
Contig Count 12
N50 Contigs 3,391,002 bp
Longest Contig 3,391,002 bp
Scaffold Count 11
N50 Scaffolds 3,391,002 bp
Longest Scaffold 3,391,002 bp
Genome Size 4,578,674 bp
Protein Count 4,182
Coding Density 87.91%
GC Percentage 34.25%
Ambiguous Bases 27
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name Niameyia massiliensis
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3501706
Country None
Date 2015-8-20
Genbank Assembly Accession GCA_001282685.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,119
Refseq Category representative genome
Seq Rel Date 2015/08/20
Spanned Gaps 1
Species Taxid 1658108
SSU Count 10
Submitter URMITE
Taxid 1658108
Total Gap Length 93
Translation Table 11
tRNA Count (total) 114
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master CXYW00000000.1