Bifidobacterium breve
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium breve
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium breve
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium breve
NCBI Strain Identifiers BR3
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001025175.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.23%
CheckM Strain Heterogeneity 33.33
5S Count 0
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 2
N50 Contigs 2,421,115 bp
Longest Contig 2,421,115 bp
Scaffold Count 2
N50 Scaffolds 2,421,115 bp
Longest Scaffold 2,421,115 bp
Genome Size 2,426,006 bp
Protein Count 2,111
Coding Density 86.55%
GC Percentage 59.09%
Ambiguous Bases N/A
GTDB representative GCA_001025175.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM128142v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03271681
Country Korea
Date 2015-9-14
Genbank Assembly Accession GCA_001281425.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source feces
Latitude Longitude None
Molecule Count 2
CDS Count 2,135
Refseq Category na
Seq Rel Date 2015/09/14
Spanned Gaps 0
Species Taxid 1685
SSU Count 3
Submitter Yonsei University
Taxid 1685
Total Gap Length 0
Translation Table 11
tRNA Count (total) 54
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None