Bifidobacterium infantis
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium infantis
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium longum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium longum; sb__Bifidobacterium longum subsp. infantis
NCBI Strain Identifiers BT1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000269965.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.46%
CheckM Strain Heterogeneity 100.0
5S Count 0
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 1
N50 Contigs 2,578,115 bp
Longest Contig 2,578,115 bp
Scaffold Count 1
N50 Scaffolds 2,578,115 bp
Longest Scaffold 2,578,115 bp
Genome Size 2,578,115 bp
Protein Count 2,205
Coding Density 86.03%
GC Percentage 59.39%
Ambiguous Bases N/A
GTDB representative GCA_000269965.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM128130v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03271683
Country Korea
Date 2015-09-14
Genbank Assembly Accession GCA_001281305.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source feces
Latitude Longitude None
Molecule Count 1
CDS Count 2,268
Refseq Category na
Seq Rel Date 2015/09/14
Spanned Gaps 0
Species Taxid 216816
SSU Count 3
Submitter Yonsei University
Taxid 1682
Total Gap Length 0
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None