Citrobacter portucalensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Citrobacter; s__Citrobacter portucalensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Citrobacter; s__Citrobacter portucalensis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Citrobacter; x__Citrobacter freundii complex; s__Citrobacter portucalensis
NCBI Strain Identifiers P10159
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002042885.1)
Genome Characteristics
CheckM Completeness 99.87%
CheckM Contamination 0.2%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 8
23S Count 8
tRNA Count 20
Contig Count 1
N50 Contigs 5,080,321 bp
Longest Contig 5,080,321 bp
Scaffold Count 1
N50 Scaffolds 5,080,321 bp
Longest Scaffold 5,080,321 bp
Genome Size 5,080,321 bp
Protein Count 4,867
Coding Density 87.94%
GC Percentage 51.68%
Ambiguous Bases N/A
GTDB representative GCA_002042885.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM128100v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03996567
Country China
Date 2015-09-11
Genbank Assembly Accession GCA_001281005.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Patient urine
Latitude Longitude None
Molecule Count 1
CDS Count 4,910
Refseq Category na
Seq Rel Date 2015/09/11
Spanned Gaps 0
Species Taxid 1639133
SSU Count 8
Submitter Beijing Institute of Microbiology and Epidemiology
Taxid 1639133
Total Gap Length 0
Translation Table 11
tRNA Count (total) 69
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None