Paenibacillus_C sp001280845
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Paenibacillales; f__Paenibacillaceae; g__Paenibacillus_C; s__Paenibacillus_C sp001280845
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__Bacillus sp. FJAT-28004
NCBI Strain Identifiers FJAT-28004
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.73%
CheckM Contamination 0.86%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 4
tRNA Count 20
Contig Count 43
N50 Contigs 516,273 bp
Longest Contig 1,396,104 bp
Scaffold Count 21
N50 Scaffolds 5,163,634 bp
Longest Scaffold 5,163,634 bp
Genome Size 7,479,858 bp
Protein Count 6,669
Coding Density 86.31%
GC Percentage 44.29%
Ambiguous Bases 274
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM128084v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03839969
Country China: Tibet
Date 2015-9-10
Genbank Assembly Accession GCA_001280845.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Fujian Academy of Agricultural Sciences
Latitude Longitude None
Molecule Count N/A
CDS Count 6,550
Refseq Category na
Seq Rel Date 2015/09/10
Spanned Gaps 22
Species Taxid 1679165
SSU Count 1
Submitter Fujian Academy of Agricultural Sciences
Taxid 1679165
Total Gap Length 64887
Translation Table 11
tRNA Count (total) 81
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LGHP00000000.1