Streptomyces virginiae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces virginiae
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces sp. H036
NCBI Strain Identifiers H036
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000720455.1)
Genome Characteristics
CheckM Completeness 99.58%
CheckM Contamination 1.11%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 207
N50 Contigs 102,927 bp
Longest Contig 521,660 bp
Scaffold Count 207
N50 Scaffolds 102,927 bp
Longest Scaffold 521,660 bp
Genome Size 8,621,977 bp
Protein Count 7,853
Coding Density 88.80%
GC Percentage 72.33%
Ambiguous Bases 10
GTDB representative GCA_000720455.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM127992v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02900638
Country USA: IL; Urbana
Date 2015-09-04
Genbank Assembly Accession GCA_001279925.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude None
Molecule Count N/A
CDS Count 7,841
Refseq Category na
Seq Rel Date 2015/09/04
Spanned Gaps 0
Species Taxid 1519487
SSU Count 1
Submitter University of Illinois at Urbana-Champaign
Taxid 1519487
Total Gap Length 0
Translation Table 11
tRNA Count (total) 73
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LGDS00000000.1