Streptomyces virginiae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces virginiae
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces sp. H021
NCBI Strain Identifiers H021
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000720455.1)
Genome Characteristics
CheckM Completeness 99.58%
CheckM Contamination 1.28%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 1
23S Count 6
tRNA Count 20
Contig Count 283
N50 Contigs 74,316 bp
Longest Contig 275,644 bp
Scaffold Count 283
N50 Scaffolds 74,316 bp
Longest Scaffold 275,644 bp
Genome Size 8,062,295 bp
Protein Count 7,309
Coding Density 88.47%
GC Percentage 72.46%
Ambiguous Bases N/A
GTDB representative GCA_000720455.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM127949v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02900637
Country USA: IL; Urbana
Date 2015-09-04
Genbank Assembly Accession GCA_001279495.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude None
Molecule Count N/A
CDS Count 7,312
Refseq Category na
Seq Rel Date 2015/09/04
Spanned Gaps 0
Species Taxid 1519486
SSU Count 1
Submitter University of Illinois at Urbana-Champaign
Taxid 1519486
Total Gap Length 0
Translation Table 11
tRNA Count (total) 72
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LGDR00000000.1